PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 151aa MW: 17522.2 Da PI: 10.0527 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 49.4 | 5.9e-16 | 3 | 52 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ie++ vt+skR++g+ KKA+E S+L++a+v v+++ ++gk + yss PHU06633.1 3 LIEDNKAHIVTLSKRKKGLCKKAKEYSTLTGADVGVVLITPSGKPHFYSS 52 6999999*************************************998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MKLIEDNKAH IVTLSKRKKG LCKKAKEYST LTGADVGVVL ITPSGKPHFY SSTSIEKITD 60 KFLKLKQDDH QRDHDDVGKS NVFETFEDLR KEVQTLNEKE KERILRYKIM HPHSEVPPDK 120 HRLEQLEAIK SRLDKIKNEK KRLCSSQANQ V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34440.1 | 2e-15 | M-type_MADS family protein |