PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06585.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 429aa MW: 46999.1 Da PI: 4.4839

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.9	1.5e-10	123	167	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+ E+ ++++ ++G g+Wk+I+r +Rt+ q+ s+ qky PHU06585.1 123 SWTELEHRSFLRGLDKYGRGDWKSISRNCVITRTPTQVASHAQKY 167 6************************99989**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MLKLIRFLNP LQELSLFMFE SFLVDPKKMS TDRTCNSSFW TKDEDKVLEN TLAIYSDDKD 60 LFTKMEEALP GKSRDDIINH YNILIEDVEA IDSGRVPLPN YLELQSDSNQ NSRADVEWRR 120 GASWTELEHR SFLRGLDKYG RGDWKSISRN CVITRTPTQV ASHAQKYFKR LQAVPKEKRR 180 ASILNITSAD AEAAGTSQAV PSTKNEIMLP RESINAEQTI AVAEGESSGH DAVFVNGMDS 240 LNPDRNGEFI FSIDDIIMEE EDVNETGFLV DAGRSLLPRE QPCAAASTGA YGHPITRIGS 300 DLEALLTEPR EEDNDINSIF VVRKAPTSHE VLLNAAHSGI SSYAAASFGA ENAPESNVAA 360 YSGMSSYADA SSDAVNAPDN MVAAHSGMTN FAVTSRFASN APQDTVAAHA SQLPPFSLSS 420 NFDVGDAPM

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MLKLIRFLNP LQELSLFMFE SFLVDPKKMS TDRTCNSSFW TKDEDKVLEN TLAIYSDDKD  60
LFTKMEEALP GKSRDDIINH YNILIEDVEA IDSGRVPLPN YLELQSDSNQ NSRADVEWRR  120
GASWTELEHR SFLRGLDKYG RGDWKSISRN CVITRTPTQV ASHAQKYFKR LQAVPKEKRR  180
ASILNITSAD AEAAGTSQAV PSTKNEIMLP RESINAEQTI AVAEGESSGH DAVFVNGMDS  240
LNPDRNGEFI FSIDDIIMEE EDVNETGFLV DAGRSLLPRE QPCAAASTGA YGHPITRIGS  300
DLEALLTEPR EEDNDINSIF VVRKAPTSHE VLLNAAHSGI SSYAAASFGA ENAPESNVAA  360
YSGMSSYADA SSDAVNAPDN MVAAHSGMTN FAVTSRFASN APQDTVAAHA SQLPPFSLSS  420
NFDVGDAPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	6e-47	MYB family protein