PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06510.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 515aa MW: 57779.7 Da PI: 6.8594

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31	6e-10	400	447	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +l+d+v+q+G g+W+ I + +Rt+ ++k++w+++l PHU06510.1 400 WTVSEVRKLIDGVAQYGVGRWSHIKKLYFsssGHRTPVDLKDKWRNLL 447 ************************9999999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
QNSAFRSGLA SLGVWFDEPE TRDDHASISG ALCFDEKRVL RGMERKGALY NIGSSIAPKR 60 ENDINHEVLD LKQSQFEAGK VQAQNDLSTP CEDYLLDIEF AESITNLDYG SSRGLLDPIL 120 ESQITLPSCD GTDSCGMPYS SGLVAQEAQS QNAMFGLTNS ELHDLSHHKC ESRILVEYNA 180 VKFPTAFNPG DISNVDDVAD FFAEAVSSEK MNDSMIDHSA LTSNGISLMS NPTQNEGQDV 240 NCESFDVHES AVIGPPVTSQ VINVDTPVTQ KRLRKPTRRY IDESSDLNAR RSRKKTEVST 300 SAPESKNKFL KVRCQKKSRA ESMEMELFSE ESSYKAIQVP FASLVNEECD ERPASNAIQV 360 FKPHKEDLHK EPMVVNPKDD AVAPKKLDQD GARRKHHRLW TVSEVRKLID GVAQYGVGRW 420 SHIKKLYFSS SGHRTPVDLK DKWRNLLKAC YLQKQSKITE KGKHNLSWRP LPKSVLHRVG 480 ELANMHPYPR NRRCESSRSP CASPSPEHFN NTNIQ

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

QNSAFRSGLA SLGVWFDEPE TRDDHASISG ALCFDEKRVL RGMERKGALY NIGSSIAPKR  60
ENDINHEVLD LKQSQFEAGK VQAQNDLSTP CEDYLLDIEF AESITNLDYG SSRGLLDPIL  120
ESQITLPSCD GTDSCGMPYS SGLVAQEAQS QNAMFGLTNS ELHDLSHHKC ESRILVEYNA  180
VKFPTAFNPG DISNVDDVAD FFAEAVSSEK MNDSMIDHSA LTSNGISLMS NPTQNEGQDV  240
NCESFDVHES AVIGPPVTSQ VINVDTPVTQ KRLRKPTRRY IDESSDLNAR RSRKKTEVST  300
SAPESKNKFL KVRCQKKSRA ESMEMELFSE ESSYKAIQVP FASLVNEECD ERPASNAIQV  360
FKPHKEDLHK EPMVVNPKDD AVAPKKLDQD GARRKHHRLW TVSEVRKLID GVAQYGVGRW  420
SHIKKLYFSS SGHRTPVDLK DKWRNLLKAC YLQKQSKITE KGKHNLSWRP LPKSVLHRVG  480
ELANMHPYPR NRRCESSRSP CASPSPEHFN NTNIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	8e-26	MYB_related family protein