PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06496.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 818aa MW: 90646.4 Da PI: 6.9743

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.3	7.2e-08	85	127	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I ++++ + q++++++ + PHU06496.1 85 AWTRQEEESFFSALRQVGKN-FERITSRVQ-SKNKDQVRHYYYRL 127 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MQMVQQVSLD CDTCLHPETF MCKDGFSGVT QNPAVALPVI PSKDHPVSQQ SVLTHDHAVT 60 QLVSFSQDQV ILPQPAKRQT RQWAAWTRQE EESFFSALRQ VGKNFERITS RVQSKNKDQV 120 RHYYYRLVRR MNKLLGPELC LDAKNSKETN AAMLRWWSLL EKYSCKASKL HLKPRRFKIF 180 VETLESQLVK DRKKNVKRRP SQGESSSTAA ASPSSHGRVS TNDSRTVKVV LLDNKDAQKF 240 GSGKGPSVKR NVTMGVNRGN VKVDSSVKNA RHRRRTGSSS TAAYKRWEKA AIAGVSLVAD 300 AAEHLERTTI DKDVGPVQNS QGINGFEHVG KDVHSLSTLS QIFLKETNLQ SCMKLKLQLF 360 PVDEGTRRAL EMDNHNPFLE LTLSNRKKMS SVMEHLNRKW GSSSIATGEL VLFPFHVQME 420 SLVRSLRWTK DTTQIAADVH NLIGRPPVFR LKYGWFPNAE LGTSQEPLSY TVPFVQNTNT 480 NITNEKNAEI PASSHGSLVR FSKEPLPSNP RMTVTSSSNK LGESNLQASM GLNTYTSDHD 540 ETLPSHRREN WDATTAEQDD MHDMQGTKAS ALSAGDWEDS FTNISVGDLL FDAPDDEQTD 600 CVDSALPGSS HFLHQTPLSC DSFDAAIAAH IYKHQSKADS QMALPPQASS IWNAEDTCDA 660 FAFKKNVAFR DKEQRSSSNV GAENSQRIAQ SSSLVLDAGI KDLPGNMESF TGETAHEDPM 720 DECQSDAQAL DGSAKDPNGL SGIYWTDSLG PLELDAPSCR YHNEDITLSD SFGGLNRLIV 780 DSLDAFQNCS FFGLDKKEPA SSTAKAVETS DLKIGAEV

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MQMVQQVSLD CDTCLHPETF MCKDGFSGVT QNPAVALPVI PSKDHPVSQQ SVLTHDHAVT  60
QLVSFSQDQV ILPQPAKRQT RQWAAWTRQE EESFFSALRQ VGKNFERITS RVQSKNKDQV  120
RHYYYRLVRR MNKLLGPELC LDAKNSKETN AAMLRWWSLL EKYSCKASKL HLKPRRFKIF  180
VETLESQLVK DRKKNVKRRP SQGESSSTAA ASPSSHGRVS TNDSRTVKVV LLDNKDAQKF  240
GSGKGPSVKR NVTMGVNRGN VKVDSSVKNA RHRRRTGSSS TAAYKRWEKA AIAGVSLVAD  300
AAEHLERTTI DKDVGPVQNS QGINGFEHVG KDVHSLSTLS QIFLKETNLQ SCMKLKLQLF  360
PVDEGTRRAL EMDNHNPFLE LTLSNRKKMS SVMEHLNRKW GSSSIATGEL VLFPFHVQME  420
SLVRSLRWTK DTTQIAADVH NLIGRPPVFR LKYGWFPNAE LGTSQEPLSY TVPFVQNTNT  480
NITNEKNAEI PASSHGSLVR FSKEPLPSNP RMTVTSSSNK LGESNLQASM GLNTYTSDHD  540
ETLPSHRREN WDATTAEQDD MHDMQGTKAS ALSAGDWEDS FTNISVGDLL FDAPDDEQTD  600
CVDSALPGSS HFLHQTPLSC DSFDAAIAAH IYKHQSKADS QMALPPQASS IWNAEDTCDA  660
FAFKKNVAFR DKEQRSSSNV GAENSQRIAQ SSSLVLDAGI KDLPGNMESF TGETAHEDPM  720
DECQSDAQAL DGSAKDPNGL SGIYWTDSLG PLELDAPSCR YHNEDITLSD SFGGLNRLIV  780
DSLDAFQNCS FFGLDKKEPA SSTAKAVETS DLKIGAEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein