PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU06346.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 194aa MW: 22499.2 Da PI: 8.9042 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.8 | 5e-20 | 19 | 71 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++++qle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k PHU06346.1 19 KKRLSSDQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWK 71 55699***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.9 | 6.7e-39 | 18 | 109 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kk+rls++q+++LE+sF+ee kL+p+rK++la+eLglqprq+avWFqnrRAR+k+kqlE+ y++Lk+ yd +++e+++L++ev +Lr+ lke PHU06346.1 18 KKKRLSSDQLESLENSFQEEIKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKAKQLERLYDSLKQDYDVVSREKQKLQDEVLALRAILKE 109 9**************************************************************************************88875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MDNNNNNNFV FNQHQLDKKK RLSSDQLESL ENSFQEEIKL DPDRKMKLAK ELGLQPRQIA 60 VWFQNRRARW KAKQLERLYD SLKQDYDVVS REKQKLQDEV LALRAILKEQ ATKKQVNSTV 120 YTEISGEETV ESTSMPSSNK TITRAITTSS HQNNNIINNN NNNSNMAECS YVYNVVDGLN 180 PVMPPYWASL PTYP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 47 | KKKRLSSDQLESLENSFQEEIKLDPDRKMK |
2 | 66 | 74 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 2e-52 | HD-ZIP family protein |