PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU06156.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 263aa    MW: 30179.8 Da    PI: 6.7145
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU06156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83e-1177122454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h+e+ErrRR+riNs +++Lr+ll  +      K +Ka+ L k+v+ +++L
  PHU06156.1  77 NHKEAERRRRQRINSHLHTLRTLLSCN-----SKTDKASLLAKVVQRVREL 122
                 8***********************997.....7************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MQQQDYFQEN FDFCQYLTKN KPSSSDHNNM MMGEYTYGFD IEGIKNFCSS SSIYPHHMEF  60
QETIENNNNT PEARAINHKE AERRRRQRIN SHLHTLRTLL SCNSKTDKAS LLAKVVQRVR  120
ELKEQTSKIM QSETNFPSET DEITVLSSND CLEDGRSLIK ASLCCEDRLN LIPDLIETLK  180
SLGLSPLRAE MVTLGGRIRN VVILAVDHRK ESNNNSTDDD AEEEESLLLL RDALRSIIQR  240
SSYGSTGERG KKRRVLKHGT TNY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17486RAINHKEAERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.15e-50bHLH family protein