PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU06150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 354aa MW: 38320.6 Da PI: 6.727 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87.1 | 1.2e-27 | 97 | 179 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg PHU06150.1 97 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdasnslacpdqkqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 179 689********...*****999*******************************************************.*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 354 aa Download sequence |
MLNNLEDGGK NVGGNGRGGS GGGGTRSWGT TVSGQSVSTS SSIGSPSSRS EAAIATPASD 60 STFLRLNNLD IHADDAGSQG TAGKKKRAQR ATGGDKSGRG LRQFSMKVCE KVESKGRTTY 120 NEVADELVAE FSDASNSLAC PDQKQYDEKN IRRRVYDALN VLMAMDIISK DKKEIQWKGL 180 PRTDANDIEE LKTERLSLRN RIEKKAAYLE ELEEQYVGLQ NLIKRNEQLY GSGNAPSGGV 240 ALPFILVQTR PHATVEVEIS EDMQLVHFDF NSTPFELHDD NYVLKAMKFC GRQNDDVVAA 300 QNVAAADGGE GSSSSMANMF QHQIPHPSAP NTSARIPTSP PVPGILKARV KHEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-134 | E2F/DP family protein |