PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU06047.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 423aa MW: 47936.3 Da PI: 6.8822

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU06047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.1e-32	241	295	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rFve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR PHU06047.1 241 KTRIRWTQDLHDRFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRN 295 68****************************************************6 PP
2	Myb_DNA-binding	48.3	2.3e-15	245	294	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++++v++v++lGg t+k+I + m +g+t ++ks++qky+ PHU06047.1 245 RWTQDLHDRFVECVNRLGGAdkaTPKAILKLMDsEGLTIFHVKSHLQKYR 294 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MSIQNYELPS DYNLEFPQMG FCFQPENDHQ QLQQQQNLWP SNDSSSSSRS MISRIGSSPS 60 GFFATERYLG LTQYEYQDNN NNNSCSQLSK NHDPQVAAFT QQCGNGFLVT SSSARVDTDI 120 PKISMPSFIR PLDSHGLYGN PFSNLSEKER VLLLKRGHGF KPWKQPLAEM QGKAAYDTPL 180 WWGPSPDTAH SGSVSAPGFP FMKVSNNTCG FNLVHIRQQS GSQSANSYNN SGCSGGSLSS 240 KTRIRWTQDL HDRFVECVNR LGGADKATPK AILKLMDSEG LTIFHVKSHL QKYRNAKFIP 300 ESTEGKTEKM DKQNNVTQID GKTGMQIKEA LHMQLEVQRR LHDQLEIQRK LQLRIEEQGE 360 QLKKIFEQQQ QTTRSLLETR NSSISSHADP FTPHEDEVFV EESFDNSHFQ SKISYNDMET 420 TFV

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MSIQNYELPS DYNLEFPQMG FCFQPENDHQ QLQQQQNLWP SNDSSSSSRS MISRIGSSPS  60
GFFATERYLG LTQYEYQDNN NNNSCSQLSK NHDPQVAAFT QQCGNGFLVT SSSARVDTDI  120
PKISMPSFIR PLDSHGLYGN PFSNLSEKER VLLLKRGHGF KPWKQPLAEM QGKAAYDTPL  180
WWGPSPDTAH SGSVSAPGFP FMKVSNNTCG FNLVHIRQQS GSQSANSYNN SGCSGGSLSS  240
KTRIRWTQDL HDRFVECVNR LGGADKATPK AILKLMDSEG LTIFHVKSHL QKYRNAKFIP  300
ESTEGKTEKM DKQNNVTQID GKTGMQIKEA LHMQLEVQRR LHDQLEIQRK LQLRIEEQGE  360
QLKKIFEQQQ QTTRSLLETR NSSISSHADP FTPHEDEVFV EESFDNSHFQ SKISYNDMET  420
TFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	3e-69	G2-like family protein