PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU05976.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YA | ||||||||
Protein Properties | Length: 162aa MW: 18491.5 Da PI: 10.1822 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 94.6 | 1.1e-29 | 15 | 71 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq Rak+ ++k+ ksrkpylheSRh+hA+rR+R gGrF PHU05976.1 15 EEPMYVNAKQYHGILRRRQLRAKAVLQQKV-VKSRKPYLHESRHRHAMRRARDGGGRF 71 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MHHNGRMILP IEVKEEPMYV NAKQYHGILR RRQLRAKAVL QQKVVKSRKP YLHESRHRHA 60 MRRARDGGGR FLNTKKNNQH PTNNNNNNAT ASSEGKGGSL VSDSSANYLL NYEQDIGSSN 120 NGEGFQFQGI HGTTTENLQL GCHYQWNLND NNHCNCMHSA HF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 65 | RHRHAMRRAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 7e-30 | NF-YA family protein |