PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05962.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 535aa MW: 60796.6 Da PI: 8.6943

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05962.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	25.5	3.7e-08	15	87	54	127
NAM 54 eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +k yfF+k +kk+a g+r r ++ g W+ +k+v++ + + vg kk + + ++ W+m e + PHU05962.1 15 AKKVKYFFTKLKKKKADGRRFIRtVIGGGSWNGLDGEKSVYD-GPKIVGSKKNYRYQ-YKGYQADDVVWTMRENS 87 33456****************8889***********.999****996.455556699**9966 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MGDIRKQFDK RDEDAKKVKY FFTKLKKKKA DGRRFIRTVI GGGSWNGLDG EKSVYDGPKI 60 VGSKKNYRYQ YKGYQADDVV WTMRENSLDE KILKALRRRS LMHYEDVVLC CVKRKINVHA 120 RNLKELGDCM PMEITSGDEV VAAAMDATLQ TTQQHKHNNV FQELQQDQNS EQLINQVQNI 180 EDIAPFARNH NGYVASYIEQ GTANFHDSCP VYPSTLFEHN NAFQELQQDQ NSEQVNVVQG 240 NNIEERADFS STLADLLNDI GTQPQLLIGI NVHARDHKEL GDYTLMEIPS GDEVVAAMDA 300 RLLTTQQHDS CLLNPFTSSE HNNVFHELQQ DQSSSGGNKR CSFTSPLYVY NGSLAKTLLR 360 NYILSGLQDD LYNVYSGTKT SKERKSVVSQ VQELQVIIQD LLAEGLIVND AFQVAAIVEK 420 LPPLWKDFKN YLKHKQKEMT VEDLIVRLRI EEDNKAAERR SKGNSRMNGA HIVEDGQNKS 480 KKIKKVDHGS NQPNKKFKEK CFNCGKIGHK STDCRASKKG KKKGQANMIE SNKKI

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MGDIRKQFDK RDEDAKKVKY FFTKLKKKKA DGRRFIRTVI GGGSWNGLDG EKSVYDGPKI  60
VGSKKNYRYQ YKGYQADDVV WTMRENSLDE KILKALRRRS LMHYEDVVLC CVKRKINVHA  120
RNLKELGDCM PMEITSGDEV VAAAMDATLQ TTQQHKHNNV FQELQQDQNS EQLINQVQNI  180
EDIAPFARNH NGYVASYIEQ GTANFHDSCP VYPSTLFEHN NAFQELQQDQ NSEQVNVVQG  240
NNIEERADFS STLADLLNDI GTQPQLLIGI NVHARDHKEL GDYTLMEIPS GDEVVAAMDA  300
RLLTTQQHDS CLLNPFTSSE HNNVFHELQQ DQSSSGGNKR CSFTSPLYVY NGSLAKTLLR  360
NYILSGLQDD LYNVYSGTKT SKERKSVVSQ VQELQVIIQD LLAEGLIVND AFQVAAIVEK  420
LPPLWKDFKN YLKHKQKEMT VEDLIVRLRI EEDNKAAERR SKGNSRMNGA HIVEDGQNKS  480
KKIKKVDHGS NQPNKKFKEK CFNCGKIGHK STDCRASKKG KKKGQANMIE SNKKI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	481	522	KKIKKVDHGSNQPNKKFKEKCFNCGKIGHKSTDCRASKKGKK