PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05785.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 333aa MW: 37193 Da PI: 8.5569

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.3	5.6e-18	183	237	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k PHU05785.1 183 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 237 788899***********************************************98 PP
2	HD-ZIP_I/II	127.9	4.4e-41	183	273	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eLr +lk PHU05785.1 183 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCETLTEENKRLHKELQELR-ALK 273 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MELALSLGGE TPKPIMFLEK SSSSSSSLHE KKVNKDDLGF CMVLGKCNEG HEDENGRRKR 60 SRNHHQEVTI CSKGSSSKDL SLQLDLLPSS KNTSSQLGFP WLSQNLATEP AGLTNGPALE 120 AEEGAALSSP NSEISSFQMN FPIYRNGKLI NMKRDQYDGD YKWGNINNYS TSRASDEDDE 180 SARKKLRLTK EQSAFLEESF KEHNTLNPKQ KLALAKQLNL RPRQVEVWFQ NRRARTKLKQ 240 TEVDCEYLKK CCETLTEENK RLHKELQELR ALKSSQPFYM QLPATTLTMC PSCERVATTS 300 ATTTTAAATT TPVGAAADTA GVHNHKLITL MTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	240	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	1e-67	HD-ZIP family protein