PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05669.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 263aa    MW: 30022.8 Da    PI: 7.0863
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.32.3e-3113118199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k ltpsdv+k++rlv+pk+ ae++       + + e++  l++ede g+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F++++ +  + 
  PHU05669.1  13 FEKPLTPSDVGKLNRLVIPKQNAEKYfplsesiNDSGEKGYLLSFEDELGKLWKFRYSYWNSSQSYVLTKGWSRFVKDKKLESGDVVLFERHRVDFDRQ 111
                 99****************************99944455889*************************************************876677777 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++rk
  PHU05669.1 112 FIGWRRK 118
                 9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEEIVESEKV HLFEKPLTPS DVGKLNRLVI PKQNAEKYFP LSESINDSGE KGYLLSFEDE  60
LGKLWKFRYS YWNSSQSYVL TKGWSRFVKD KKLESGDVVL FERHRVDFDR QFIGWRRKNG  120
GGGDGGGGGG AGAAEYVYRP SVGGPYQNEF RHAGRGVMHN QTTTNGNNTR RQVRLFGVNL  180
ECKVDESSSW SESSTPDGSL SSNHHQQSQD YQGQVGQHYY QYVHNSNSHV VPAASSYNNY  240
YHNNNMDMDY SRDINQMRYD NQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.27e-59B3 family protein