PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05434.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 287aa    MW: 31628.8 Da    PI: 9.1915
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73e-142670147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
       PHU05434.1 26 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 70
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MANNSSTPTD ASGKKVRKPY TITKSRESWT EEEHDKFLEA LQLFDRDWKK IEDFVGSKTV  60
IQIRSHAQKY FLKVQKNGSI AHVPPPRPKR KAAHPYPQKA PKNVLVPLQA SMGYPSSMNS  120
LPPGYPSWDD TSVLINSPTG GVMSSQDEYH LQRIQADIGS KGATLIGNSS ISGIRSSNRA  180
APNSELPEQS KLGSVPHGIP DFAEVYNFIG SVFDPDTRGH VQKLKEMDPI NFETVLLLMR  240
NLTMNLASPD FEPIKNVLST YDLNTKVVGL PTGGAVSNHN DLSCQTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-107MYB_related family protein