PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05417.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 464aa MW: 51333.7 Da PI: 9.9137

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	194	250	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d++++ei+Y+geHnh+k PHU05417.1 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSY-DGQITEIVYRGEHNHPK 250 9*************************************.*************85 PP
2	WRKY	87.7	9.9e-28	383	439	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dg++WrKYGqK+vkgs +pr YYrC s++C+v k ve +++dp+++++tYeg+Hnh PHU05417.1 383 EDGFRWRKYGQKVVKGSSYPRRYYRCISPKCSVWKFVEGTTDDPRAFITTYEGKHNH 439 7******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEANEAAKLP IARPVASRPR CPVYKSFSEL LTGAVDISST NVHSETAITA IRPKTIRLKP 60 ATNHALVGEP SSQVGVSEAP VGFGADNILQ SVEKPKVLYK PIAKLAPKKT IPLLENKGSA 120 VSDQLRVIAD AEAHIQSANE VKQQHDPTTE SKQSLSAKSG QDKKKVCSTI VSGSTEEVAQ 180 SLINTSNVDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI 240 VYRGEHNHPK PQPPKRNLSD GHRRTAICND TSKETNNPAW SNQHPQISEA YVCRIENQND 300 GGLTIRSSKV PCFYDPIVTA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKCPSSGA 360 GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGQKVVKGSS YPRRYYRCIS PKCSVWKFVE 420 GTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEANEAAKLP IARPVASRPR CPVYKSFSEL LTGAVDISST NVHSETAITA IRPKTIRLKP  60
ATNHALVGEP SSQVGVSEAP VGFGADNILQ SVEKPKVLYK PIAKLAPKKT IPLLENKGSA  120
VSDQLRVIAD AEAHIQSANE VKQQHDPTTE SKQSLSAKSG QDKKKVCSTI VSGSTEEVAQ  180
SLINTSNVDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI  240
VYRGEHNHPK PQPPKRNLSD GHRRTAICND TSKETNNPAW SNQHPQISEA YVCRIENQND  300
GGLTIRSSKV PCFYDPIVTA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKCPSSGA  360
GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGQKVVKGSS YPRRYYRCIS PKCSVWKFVE  420
GTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	2e-85	WRKY family protein