PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05383.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 356aa    MW: 40521.4 Da    PI: 7.8602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.00058253274930
                 HHHHHHHHHHHHHHHHCTSCCC CS
         HLH   9 ErrRRdriNsafeeLrellPka 30 
                  rrRR+r  s +++L ++lP++
  PHU05383.1 253 SRRRRSRPSSEIQKLAKILPTD 274
                 59******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MTPKRKEIEL SPSKGTSAAA QLHPPLYEFA LQALSQSGAE DNEQGEDESF KRDNPNANIP  60
SAEELVKTFS IDRYPAKHDG VINVINALTA FVKEMTSKRS VIPSKRISYP DTPLEIKVDV  120
TATVEEHNMT VDNPSTVSKD EEKVKPDINV IFYYLRKKAK LQTQEQYRYT TGNYLYKVYI  180
NNAYDRFCQQ QTKVFLNEEC LVNIIKGFSI PAGLPWHLVD KVYIPINCGN EFHWVLAIVV  240
LKDRRIRVCD LMSRRRRSRP SSEIQKLAKI LPTDLDMSDF LDQKVRTDWL TIKAYRNKMA  300
NLFDVQYVDG IVQQIIGSLD CGPFVAAYAE YLSDGLQVPN DGLNAGLLRK IYAALL