PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05238.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 414aa MW: 46675.2 Da PI: 7.2524

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.5	1.5e-33	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl PHU05238.1 44 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	62.6	7.8e-20	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg +g+tl+++ks++qky+ PHU05238.1 46 RLKWTPDLHERFIEAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 97 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MYHHHHQDNS MHPSTRMSIP ERHLFLQGGN GNGDSGLVLS TDAKPRLKWT PDLHERFIEA 60 VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NLHGQANASG ANKAAAGVER 120 ISENSAACIS NPSMGPQPNK NIQISEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ 180 SVLEKAQETL GRQNMETVGL EAVKVQLSEF VSKASNQCLN SAFPDIKELS GFHSQRTQAT 240 QPTDRSIDSC LTSRDGSLRD NAMHDNPIGL RPFDFTPSME CKDIENDTRI QQTELRWCDN 300 LKENRRLFSP VNEGREKAFT RETNCNNLSI SIGLQDEKLN GSMNYSDGNF SGTERDVKLF 360 HQVAKRSESV PERQKSSQEY KLSYFEPKLD LNMHDETDAA SSCKQFDLNG FSWG

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MYHHHHQDNS MHPSTRMSIP ERHLFLQGGN GNGDSGLVLS TDAKPRLKWT PDLHERFIEA  60
VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NLHGQANASG ANKAAAGVER  120
ISENSAACIS NPSMGPQPNK NIQISEAIQM QIEVQRRLHE QLEVQRHLQL RIEAQGKYLQ  180
SVLEKAQETL GRQNMETVGL EAVKVQLSEF VSKASNQCLN SAFPDIKELS GFHSQRTQAT  240
QPTDRSIDSC LTSRDGSLRD NAMHDNPIGL RPFDFTPSME CKDIENDTRI QQTELRWCDN  300
LKENRRLFSP VNEGREKAFT RETNCNNLSI SIGLQDEKLN GSMNYSDGNF SGTERDVKLF  360
HQVAKRSESV PERQKSSQEY KLSYFEPKLD LNMHDETDAA SSCKQFDLNG FSWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	1e-130	G2-like family protein