PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU05221.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 232aa MW: 26729.1 Da PI: 7.836 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 81 | 1.2e-25 | 119 | 180 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg+ WrKYGqK++ +++fpr+Y+rCt++ gC++ k+v+r +e+p ++ itY g+H+++ PHU05221.1 119 VDDGHGWRKYGQKQILNAKFPRNYFRCTHKfdqGCQASKQVQRIQENPPLFRITYYGHHTCK 180 59***************************9999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MESFLLENTI SDLEKVMEEL NRGKKFTRRL REIIKKPKIN VGNEDAYMSS AEDLVGKIMN 60 SFCASLSILS SDESTEEVSQ KSMEDSSGSC KTSSLKDRRG CYKRRRTLET SIKETSTLVD 120 DGHGWRKYGQ KQILNAKFPR NYFRCTHKFD QGCQASKQVQ RIQENPPLFR ITYYGHHTCK 180 TFPKVSQMIF DSPNDQGDSN SVLLNFNSGN NHHQFLDMTV ETLDFVDLSF EF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-43 | WRKY family protein |