PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU05217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 141aa MW: 16295.8 Da PI: 10.506 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.7 | 3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqv+fskRr g+lKKA+ELS+LCdaeva+++fs++gk y ++s PHU05217.1 9 KRIENQTNRQVSFSKRRSGLLKKAYELSILCDAEVALLLFSPSGKAYQFAS 59 79**********************************************986 PP | |||||||
2 | K-box | 49.2 | 2.3e-17 | 81 | 141 | 9 | 69 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + + +e ++++++ +++ i++L+ +hl GedL+sL +keL+qLe+qL + ++iRskK PHU05217.1 81 QGLRAMEVWKTKINDMRRTIDELEVRDKHLAGEDLSSLGMKELKQLERQLRIGAERIRSKK 141 66677899****************999*********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
MGRGKVELKR IENQTNRQVS FSKRRSGLLK KAYELSILCD AEVALLLFSP SGKAYQFASH 60 DMERTILRYK NEVGLSNNSD QGLRAMEVWK TKINDMRRTI DELEVRDKHL AGEDLSSLGM 120 KELKQLERQL RIGAERIRSK K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.2 | 4e-44 | MIKC_MADS family protein |