PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU05116.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 365aa MW: 39628.9 Da PI: 9.2126

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU05116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.9	3.9e-37	78	136	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + +kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGa+r vPvGgg+r+nk+ss PHU05116.1 78 AVQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGAIRSVPVGGGCRRNKRSS 136 6789****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MVFSFISAYL DPSNWQQQVG YGIPNTQLPS APPQPTPPHP LATTPPPPRP HGVVGEDSIR 60 PGSMADRARL ANIPMSEAVQ KCPRCESTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAI 120 RSVPVGGGCR RNKRSSTNST TTSATKSSNN NNTSKSPASS QATNSGSTSN NSCTFSSQSS 180 AASLLGLMNP HIHPLRFMSP LGQLTDQHFT QNDNVTMNYS SFSSSSPAPV IVGSTIESTN 240 FQLGMSNNLE QWRLHQQLAS QFPYNLYGGL DSSSASGSGL YHFHPTHYSS NEVGGGGGVI 300 SQIRSKVSNP MLTQLALMKM EDNQDHLATM PRQFLGHENW PSNGSHANWN ELSVSFSSSS 360 TSNVL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MVFSFISAYL DPSNWQQQVG YGIPNTQLPS APPQPTPPHP LATTPPPPRP HGVVGEDSIR  60
PGSMADRARL ANIPMSEAVQ KCPRCESTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAI  120
RSVPVGGGCR RNKRSSTNST TTSATKSSNN NNTSKSPASS QATNSGSTSN NSCTFSSQSS  180
AASLLGLMNP HIHPLRFMSP LGQLTDQHFT QNDNVTMNYS SFSSSSPAPV IVGSTIESTN  240
FQLGMSNNLE QWRLHQQLAS QFPYNLYGGL DSSSASGSGL YHFHPTHYSS NEVGGGGGVI  300
SQIRSKVSNP MLTQLALMKM EDNQDHLATM PRQFLGHENW PSNGSHANWN ELSVSFSSSS  360
TSNVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	9e-42	Dof family protein