PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU05101.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 831aa    MW: 93984.2 Da    PI: 6.8269
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU05101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS372.94e-1144578291374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d + a +lL++++ ++sp gd +qRla++f+ +L+arla+++s++ykal  ++ts    ++ l+a++l+   +P+ k+s +t N
  PHU05101.1 457 LRTLLITCAQAVAADDCRSAAELLKQIRRHSSPIGDGNQRLAHCFADGLEARLAGTGSQIYKALINKKTS---AADFLKAFHLYLASCPFRKISGFTSN 552
                 6789************************************************************999998...8************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I   + +++rvHiiDf+i +G+QWp+L+q +a+R++gpp+lRiTg++ p++g   +e++eetg+rL+++A++++vpfe+++ +ak++e+++le+L++
  PHU05101.1 553 KTIITKARNASRVHIIDFGILYGFQWPTLIQRIAAREGGPPRLRITGIEFPQPGfrPAERIEETGRRLSDYAKSFNVPFEYQA-IAKKWETIRLEDLKL 650
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E l+Vn+ ++ ++l+de+v  es r+ vL+l+++++P+++++   +  ++++ F++rf e l ++salfd+lea++pre  er+ +Ere++gre+ 
  PHU05101.1 651 EKDEFLVVNCLYRFKNLHDETVLAESSRTLVLNLIREINPDIFIHGIVNGAYSAPFFVTRFREVLFHFSALFDMLEANVPREFPERMLIEREIFGREAL 749
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsek.aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv+aceg er+er et+++W+ rl +a F+++p++++ +++ a   +r+ + + + +++++++++lgWk+r+++++S+W+
  PHU05101.1 750 NVIACEGWERVERPETYKQWQVRLLRARFTQIPFDQQgIMNMAIEKVRTSYHKDFVIDQDNKWMLLGWKGRTIYALSCWT 829
                 **********************************98835666677888888888*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 831 aa     Download sequence    
MKISNRLSYY YQGVVAFSTV DVSSDSSVSY TIKFIYTILF FQCVPTVHLS FSPILDLPKF  60
EAKMDPRFNR FPSSVNGFNL ENQSLLDFSG NWKNKEPIIG AIYPDQILAN GPRFENSFVQ  120
HNVGGVQSFS NAPSPTSNIA LTSKIGIEDD YNEDFDFSDT VLSYINQMLM EEDMEDKTHM  180
LQESLELQAK ERSFYEALGK KYPPSPQQNL SITDQNGEIL DDYCSGSLYS CTSNVGSSGG  240
YLIDPRVDSI PNDHNSSYEQ GISICNGTYS SISSSNSINN LVDGFLDSPV GPLHIPDMYN  300
DSHPIWNFRK GVEEATKFLP TNNKLLDNVI INDLLPQEKR GESGCAATQV EKRDRGGTSL  360
TGSRGRKNAH RDDKDLEEER SSKQAAVYTE STVRSEEFDV VLLHSMGDGR EALTAYRESL  420
KNARTKTTAQ NGQSKGFTVG KGGRSKKQSA KKEVIDLRTL LITCAQAVAA DDCRSAAELL  480
KQIRRHSSPI GDGNQRLAHC FADGLEARLA GTGSQIYKAL INKKTSAADF LKAFHLYLAS  540
CPFRKISGFT SNKTIITKAR NASRVHIIDF GILYGFQWPT LIQRIAAREG GPPRLRITGI  600
EFPQPGFRPA ERIEETGRRL SDYAKSFNVP FEYQAIAKKW ETIRLEDLKL EKDEFLVVNC  660
LYRFKNLHDE TVLAESSRTL VLNLIREINP DIFIHGIVNG AYSAPFFVTR FREVLFHFSA  720
LFDMLEANVP REFPERMLIE REIFGREALN VIACEGWERV ERPETYKQWQ VRLLRARFTQ  780
IPFDQQGIMN MAIEKVRTSY HKDFVIDQDN KWMLLGWKGR TIYALSCWTP I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein