PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04953.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 382aa    MW: 42773.6 Da    PI: 6.932
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.6e-31219277259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YY+C+++  C ++k+ver+++dp+++++tY+ eHnh+
  PHU04953.1 219 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkACLARKQVERNRSDPNMFIVTYTAEHNHP 277
                 79************************99889***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MEEDWDLHAV VRSCTPANTA STTTNDCDLV HGILKVDGAL MKSLRIEKDY RQFDNDQMTL  60
QRGSTTTSCN PTNNIHYLCS FQPKPNDNNN NSLFCFKDLL EQRILTTNSA TDFEESHELC  120
KPFFTTSESL TISSPRRVLP ISPISVLGRL QDLPSSSQQQ QHQHLHQLTN TKPIQPKRPL  180
SSLNGSITNC TLHAQSPRTK RRKNQLKKVC QVAADALSSD MWSWRKYGQK PIKGSPYPRG  240
YYKCSTSKAC LARKQVERNR SDPNMFIVTY TAEHNHPMPT HRNSLAGISR HKTANPNKPT  300
SLSPATNSPA PENQESSRDD KEDIFEDDDD EFGKTEPDDD FFDGLDELVI QATGDSLPEK  360
FSGTLQFPWL VNNAATTAAG GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-64WRKY family protein