PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04739.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 88aa    MW: 9841.89 Da    PI: 9.7968
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73e-091256244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WT+   + + +a + + ++   +W+ +++ +g g+t++++k ++
       PHU04739.1 12 GSWTAKQNKAFEKALAVYDKEtrdRWSNVSKAVG-GKTAEEVKRHY 56
                     79******************9*************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MSSMSSQHGS PGSWTAKQNK AFEKALAVYD KETRDRWSNV SKAVGGKTAE EVKRHYEILL  60
RDVFYVETGR VPFPNYKTTG GSHNSTSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-35MYB_related family protein