PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04647.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 315aa    MW: 36159.5 Da    PI: 6.8259
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.43.5e-24139199259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDg+ WrKYGqKe+ + ++pr+YYrCt++   gC+++k+v+r +e+p  + +tY+g+H ++
  PHU04647.1 139 DDGHVWRKYGQKEILNFPHPRNYYRCTHKfdqGCEATKQVQRIQENPPKFRTTYQGHHSCT 199
                 8***************************9999**************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEINSSVVDM KRLIKELNCG QKFTNELREL MKKHNIMLAE DLLGKIMTSF SKSLSLLYSS  60
AELHQFSQVP MVAFSYCSEE STDSCKPSSL KDQERYNKRR FPENLGKSIG KQSNGYEVHR  120
RNLRKTSATT IKEASTLEDD GHVWRKYGQK EILNFPHPRN YYRCTHKFDQ GCEATKQVQR  180
IQENPPKFRT TYQGHHSCTT YPSISQILFD SSTNEDCSVL LSFNTNTINY HQPYIHSFHS  240
TKQETKGEIS SNCFSPNVGQ SQSDDHLIRA ALSPGSSDHD VNYSSCTTNC SLEMEMKIDM  300
MVDSVDFEDL IPFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-24WRKY family protein