PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU04242.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NZZ/SPL | ||||||||
Protein Properties | Length: 334aa MW: 36519.6 Da PI: 9.8861 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 23.2 | 1.2e-07 | 18 | 332 | 35 | 314 |
NOZZLE 35 irtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlp........vpvdrgvvlqgfps........ 117 +t + s r+ sk aq+ +kkp rgmgv +ler +++e+ k+ + g t +sn+ + v vd g+ s PHU04242.1 18 TQTMNTSSTTRRRSSKNAQK-KKKPPQRGMGVEQLERLRVQEQLKNSNIHI-GGTHHQYLSSNNFPNFSssasatggVGVDSGIY-----Snsilnssp 109 45667788999999999875.577889***************999875543.444434444444444331100111156666664.....333444577 PP NOZZLE 118 .........................slgssrilcggvgsgqvmidpvispwgfvetsatthelssisnpqmynass..nnrcdtcfkkkrl.dgdqnnv 188 +gss + s + i + fv+ + + i+n n ss +rc +c kkkr+ +gd+ n+ PHU04242.1 110 lfqfpksivspsndffvqqkvvntgFIGSSATTVPTGPSIAFGNQSQIDLYRFVNPNSNNGKSKEIPNLFSNNNSScfSDRCSSCNKKKRMiNGDEMNI 208 7888888888888776666666555555555555444455555566778899******99999999999999998844589********9549***999 PP NOZZLE 189 vrsngggfskytmipppmngydeyllqsdhhqrsqgflydqriaraasvsaasasin.pyfneatnltgsreefgsvlegnprngsrgvkeyeffpgky 286 n + + y l+s + +++ ++ +r ++ s ++ +f e t +g ++ n s g+ PHU04242.1 209 SMENMIREKEVS--GTKSLFQNPYSLPSSRLEKAVEIVAIHRKGNSSLSSDEGVVMEyDFFSEKNGNTNHTSCLGKTMKMMSANNSPESSSVAAPMGNI 305 888754333322..2222333457889999999999999999888875555444444246766655555555566666665555555555444445555 PP NOZZLE 287 dervskvakvaslvgdcspntidlslkl 314 + s ++ + s d +idlslkl PHU04242.1 306 NGE-SSSVTTISWTTDTPTSSIDLSLKL 332 444.445556667788888899999997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 334 aa Download sequence |
MATSHHPILQ ENHQSRQTQT MNTSSTTRRR SSKNAQKKKK PPQRGMGVEQ LERLRVQEQL 60 KNSNIHIGGT HHQYLSSNNF PNFSSSASAT GGVGVDSGIY SNSILNSSPL FQFPKSIVSP 120 SNDFFVQQKV VNTGFIGSSA TTVPTGPSIA FGNQSQIDLY RFVNPNSNNG KSKEIPNLFS 180 NNNSSCFSDR CSSCNKKKRM INGDEMNISM ENMIREKEVS GTKSLFQNPY SLPSSRLEKA 240 VEIVAIHRKG NSSLSSDEGV VMEYDFFSEK NGNTNHTSCL GKTMKMMSAN NSPESSSVAA 300 PMGNINGESS SVTTISWTTD TPTSSIDLSL KLSF |