PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU04061.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 258aa    MW: 28200.8 Da    PI: 9.4421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU04061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-203483255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aaka+++a++ l+g
  PHU04061.1 34 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAAKAYDNAARTLRG 83
                79*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MGRGRATPAA PATPATPAVA AKVNGSAGVL KEIKFRGVRK RPWGRFAAEI RDPWKKTRVW  60
LGTFDSAEDA AKAYDNAART LRGPKAKTNF PLSPYYNQHQ QNHHHQYDML INPNPRMYHQ  120
ENPIVCQRPT SSGMSSTVES FSGPRPRPPP RQQMAVAARK YPRSPPVELD DCRSDCDSSS  180
SVVDGDGGGE GDNGDSGNIV SSSLRNPLPF DLNFPPPMDV NVELGFCAGS RIVKGLLEVV  240
WESPVLKEHP FPAKLQCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-32ERF family protein