PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03886.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 688aa MW: 75422 Da PI: 7.7791

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	490	522	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gLt +qV++WF N R + PHU03886.1 490 HPYPTDTDKHMLASQTGLTRNQVSNWFINARVR 522 89*****************************87 PP
2	BELL	105.7	3e-34	340	407	5	72
BELL 5 lqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +kkakL+ ++ee++krYkqy++q+q+v+ssFe+vagl +a+pY+slAlk++S+hF++L++ai++++ PHU03886.1 340 YLQKKAKLIFMQEEICKRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKTVSQHFKSLRNAIMDHL 407 568*************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MSDQTSEFHV AQQSRRERLR VTNSEEMDIL HQPYQYRHIS YDPSLVLSSS EMINFASTST 60 DVTQHNVGMQ QHSTSCGWNN VGIENNLSPM FVGGGGGGGV LSSGSLNLNS NVDVKPSFYS 120 GYTDMQQSVP GATTNLSTTS NVEFGSSTSV LYHDTLQEVV TSATGGNQGV ETGRVGLWNE 180 NRSYIDQSRL LYHKSCEFGT NASAKGPDNT SAQGLVLSLS PVPQSRANAM QMDKRNNASI 240 VPDNFAIAHR SAVPLGPFTG YATILKSSKF LRPAQQLLDE LCDLAAGSSS SIRCSSYTKK 300 YRDGFRVSSE SYAGPESSSG GGGIGGDLSG LNESNVRPEY LQKKAKLIFM QEEICKRYKQ 360 YHQQMQMVVS SFETVAGLSA ATPYISLALK TVSQHFKSLR NAIMDHLKSI RQALGEDLPS 420 PASGMSNKGD GNSSRLNVDQ TSLHKQKSGG GGGAGVGFFE AQQHVWRPQR GLPERAVAIL 480 RAWLFDHFLH PYPTDTDKHM LASQTGLTRN QVSNWFINAR VRVWKPMVEE IHMLETRGGP 540 GGDQIGTSIR KSDVNKLMTD RTNHVNCGHQ HLSNVHSMND LMSDKQGIGP SERFDGSNDH 600 TWRNQEKRSR IECHNIPPAA AASIDGSLMG FVPYQRNALE IGGNIGPVSL TLGLRQNAEA 660 TQQQQQLQLH EHRLRQQFGG HMIHDFVD

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MSDQTSEFHV AQQSRRERLR VTNSEEMDIL HQPYQYRHIS YDPSLVLSSS EMINFASTST  60
DVTQHNVGMQ QHSTSCGWNN VGIENNLSPM FVGGGGGGGV LSSGSLNLNS NVDVKPSFYS  120
GYTDMQQSVP GATTNLSTTS NVEFGSSTSV LYHDTLQEVV TSATGGNQGV ETGRVGLWNE  180
NRSYIDQSRL LYHKSCEFGT NASAKGPDNT SAQGLVLSLS PVPQSRANAM QMDKRNNASI  240
VPDNFAIAHR SAVPLGPFTG YATILKSSKF LRPAQQLLDE LCDLAAGSSS SIRCSSYTKK  300
YRDGFRVSSE SYAGPESSSG GGGIGGDLSG LNESNVRPEY LQKKAKLIFM QEEICKRYKQ  360
YHQQMQMVVS SFETVAGLSA ATPYISLALK TVSQHFKSLR NAIMDHLKSI RQALGEDLPS  420
PASGMSNKGD GNSSRLNVDQ TSLHKQKSGG GGGAGVGFFE AQQHVWRPQR GLPERAVAIL  480
RAWLFDHFLH PYPTDTDKHM LASQTGLTRN QVSNWFINAR VRVWKPMVEE IHMLETRGGP  540
GGDQIGTSIR KSDVNKLMTD RTNHVNCGHQ HLSNVHSMND LMSDKQGIGP SERFDGSNDH  600
TWRNQEKRSR IECHNIPPAA AASIDGSLMG FVPYQRNALE IGGNIGPVSL TLGLRQNAEA  660
TQQQQQLQLH EHRLRQQFGG HMIHDFVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	7e-83	TALE family protein