PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU03665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 176aa MW: 19702 Da PI: 4.6324 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 46.7 | 7.6e-15 | 27 | 123 | 5 | 96 |
NF-YB 5 drflPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 ++ lP a + r++k l +++ is kd+ e + fi ++++ a+d c++ kr+ in++d++ al ++ f +++eplk+ l+ +re +++ PHU03665.1 27 QEGLPKAIIRRLVKDKLSqlsTDSDISllKDSLTAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEDIEFPEFIEPLKASLEVFREKKRK 123 556999*******9876511156677655999999**********************************************************8876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MGEIEKNNKD KEIEKEKAGG TTVQIEQEGL PKAIIRRLVK DKLSQLSTDS DISLLKDSLT 60 AFSESARIFI HYLSATANDI CKESKRQIIN AEDVFKALED IEFPEFIEPL KASLEVFREK 120 KRKSSSSKSP ESNKKAKVKE PVENGKGKMK ELPSDNENED GQAGEEINEV EDSADD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 150 | KKRKSSSSKSPESNKKAKVKEPVENGKGKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 4e-38 | NF-YB family protein |