PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03584.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

E2F/DP

Protein Properties

Length: 448aa MW: 49680.4 Da PI: 4.495

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	127	192	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+i+wkg PHU03584.1 127 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAADTL---QV--QKRRIYDITNVLEGIGLIEKTLKNRIQWKG 192 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MIPQQQQQQQ QALKRQLQFS SIKPVCGDYH RFSNDPVHGS FQEPPGIVVK TPPLKRKSTA 60 TTYGQEVGDR NPVSGSANVN SPMQTPMSGK DVQKVLRTSK AKSASQAGNS NVGSPSGNDV 120 TPAGPCRYDS SLGLLTKKFI NLIKHAEDGM LDLNKAADTL QVQKRRIYDI TNVLEGIGLI 180 EKTLKNRIQW KGLDVSKPGE ANESVASLQA EVEKLTIKEH KLDDQIREMQ ERLRDLSEDE 240 NNQRWLFVTE DDIKSLPCFQ NETLIAIKAP HGTTLEVPDP DEAVDYPQRR YRIVLRSTMG 300 PIDVYLVSQF EEKFEEVNAV EAPPSVPSTS GLNENATATL DTEENREVDI VTEEKENQRV 360 CSDVGTSQDF MTGMMKIVPD VDNEADYWLL SDADVSITDM WKTESAIDWN ELDVIQEDYS 420 IANVSTPRAQ TPPPSTAEVP SAGNTTGC

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MIPQQQQQQQ QALKRQLQFS SIKPVCGDYH RFSNDPVHGS FQEPPGIVVK TPPLKRKSTA  60
TTYGQEVGDR NPVSGSANVN SPMQTPMSGK DVQKVLRTSK AKSASQAGNS NVGSPSGNDV  120
TPAGPCRYDS SLGLLTKKFI NLIKHAEDGM LDLNKAADTL QVQKRRIYDI TNVLEGIGLI  180
EKTLKNRIQW KGLDVSKPGE ANESVASLQA EVEKLTIKEH KLDDQIREMQ ERLRDLSEDE  240
NNQRWLFVTE DDIKSLPCFQ NETLIAIKAP HGTTLEVPDP DEAVDYPQRR YRIVLRSTMG  300
PIDVYLVSQF EEKFEEVNAV EAPPSVPSTS GLNENATATL DTEENREVDI VTEEKENQRV  360
CSDVGTSQDF MTGMMKIVPD VDNEADYWLL SDADVSITDM WKTESAIDWN ELDVIQEDYS  420
IANVSTPRAQ TPPPSTAEVP SAGNTTGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-154	E2F/DP family protein