PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU03499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB_related | ||||||||
Protein Properties | Length: 192aa MW: 20930.4 Da PI: 4.7128 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.6 | 3.8e-10 | 55 | 91 | 11 | 47 |
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 l++++ +++G+g+W+ I+r +g+ Rt+ q+ s+ qk+ PHU03499.1 55 LFLQGLEKYGKGDWRDISRSFGLSRTPTQVASHAQKF 91 8**********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MSLDRTYKSS TLTKEEDKAF ENALADYSGD GDLIQQIAAA VPGNLLQKFS NIILLFLQGL 60 EKYGKGDWRD ISRSFGLSRT PTQVASHAQK FYTRLNDNNN PKKRRSIHDV TSAADIIEPS 120 QGPCGGQLQR PITNYVTDAF DTGMLSIPEP VTTRISTDAI EGASADDLEK IPLGAAVGNE 180 LNSSFPGMVE YV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 3e-26 | MYB family protein |