PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03404.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 312aa MW: 35047.7 Da PI: 7.1081

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.5e-39	43	103	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ +kcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s PHU03404.1 43 EQQPQKCPRCDSANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRPS 103 57899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MCTMDPSSHV QHHHHQQEMS SQTLESMLVC TKPEQEKKPR PAEQQPQKCP RCDSANTKFC 60 YYNNYSLSQP RYFCKSCRRY WTKGGTLRNV PVGGGCRKNK RPSSSSKRSQ DNSPNSNNPI 120 SPLSIPTISS YDHSSTDLSL AFARLQKQAS GHLGIDQEHD DDNNNMSMLY NPDNTSTTVP 180 SSFLDALRGG SFLENAPNGF HHKMYYGNYG GMLGANSEEM GMNYDQEMSI GTTSASTIMT 240 TTVKQEMCGM ARSSEGDQNN NSKVLWGFPW QQMNEDHLNN MNMSDFESTN RQNWSAFGVS 300 SNWHGLINSP LM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-33	Dof family protein