PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU03256.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YA | ||||||||
Protein Properties | Length: 300aa MW: 33035.4 Da PI: 7.8302 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 95.2 | 7.5e-30 | 168 | 224 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy+rIl+RRq+Rak+e ekk +ksrkpylheSRh+hAlrR+R+sgGrF PHU03256.1 168 QEPVYVNAKQYRRILQRRQSRAKAELEKKQ-IKSRKPYLHESRHQHALRRARASGGRF 224 69************************9999.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MPSNSKIANR EETNAYNGPR STVYSEPWWN SAVYNPVSPG LMRENASDSS SLEQSVDGQS 60 QSDGGINEED DDAPEKSQSI VAFPADGSYG KVDQNFQPAA PAIPPRLDGS LAQPQQLELV 120 GHSIACAPIP HVDPYYGGMM TAFGQPLVPP HVLDMHYARM PLPQEMAQEP VYVNAKQYRR 180 ILQRRQSRAK AELEKKQIKS RKPYLHESRH QHALRRARAS GGRFAKKTDA SKGTGSVSSS 240 GSEALQFKAA DIQRRHENGR LADLQHSYSN GSSYGNQSSF QESKDEYQSA ESREGGFPGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 2e-54 | NF-YA family protein |