PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03237.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 368aa MW: 42988.1 Da PI: 6.6753

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.6	1.8e-47	65	190	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 ppG+rF P+deel+ +yLkkkv ++ l+ + ikev++yk+ P++L + +e+ewyfF++r++ky++g+r+nra+ +gyWkatg dk++++ ++ + PHU03237.1 65 PPGYRFCPHDEELIIHYLKKKVMNELLPH-DKIKEVNLYKHSPQELSeNYSMLGEREWYFFTPRNRKYPNGDRPNRAAGTGYWKATGADKPIKH-NNVK 161 9***********************999.88**********8444445899***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg +k Lvfy+g+ pkg kt+W+mhe+r+ PHU03237.1 162 VGFRKALVFYEGKPPKGDKTNWIMHEFRV 190 ***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MASFDEQSKA HIKASSWSTT QNPKMQELDK QKQVVDDEKD LVLKPNYNIN TNGKRVYVDD 60 NFVFPPGYRF CPHDEELIIH YLKKKVMNEL LPHDKIKEVN LYKHSPQELS ENYSMLGERE 120 WYFFTPRNRK YPNGDRPNRA AGTGYWKATG ADKPIKHNNV KVGFRKALVF YEGKPPKGDK 180 TNWIMHEFRV NESRRLKSHA SDMRLDDWVL CRIYKKVDKS FKASRKDEHV EVDATRSCSS 240 VGKVKNCDYE GIMDSCGELA RQHFELPHQY DITLDDPNFM PDYFSHYGAR SSNYGMYFQP 300 SFSPGNMYVW DHKGYQENNY LPVHFDFNNF CQDPCENIGE IESHIVLNND VNNGVLDVVD 360 ESSSIDKE

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MASFDEQSKA HIKASSWSTT QNPKMQELDK QKQVVDDEKD LVLKPNYNIN TNGKRVYVDD  60
NFVFPPGYRF CPHDEELIIH YLKKKVMNEL LPHDKIKEVN LYKHSPQELS ENYSMLGERE  120
WYFFTPRNRK YPNGDRPNRA AGTGYWKATG ADKPIKHNNV KVGFRKALVF YEGKPPKGDK  180
TNWIMHEFRV NESRRLKSHA SDMRLDDWVL CRIYKKVDKS FKASRKDEHV EVDATRSCSS  240
VGKVKNCDYE GIMDSCGELA RQHFELPHQY DITLDDPNFM PDYFSHYGAR SSNYGMYFQP  300
SFSPGNMYVW DHKGYQENNY LPVHFDFNNF CQDPCENIGE IESHIVLNND VNNGVLDVVD  360
ESSSIDKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	2e-62	NAC family protein