PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03039.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 261aa    MW: 28877.6 Da    PI: 5.5533
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.27.5e-12177233155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  PHU03039.1 177 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 233
                 57*******************5444.2455536655.779999**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MNSNNWLSFP LSPTHSSLPP HLQTTQSHHF SLGLVNETID NPFQSQEWNL INTQGSSEVP  60
KVADFLGMNK SENQSDLVPY NEIQANDSDF LFQNNSLMPV QNAVAAVPAS NYDLQENACN  120
IQSLTLSMGS GKGSTSETSA SPSATATTAS ASAENSNTSI VEAAPRRTLD TFGQRTSIYR  180
GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA ARAYDLAALK YWGTSTTTNF  240
PVISLHLEPY NIVDEMLDEK H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.13e-92AP2 family protein