PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU03021.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 804aa MW: 91489.1 Da PI: 5.5737

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU03021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	153.3	5.4e-48	83	189	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 +e + rwlk+ e++ iL n+e+h+ +sgsl+L+n++++r+frkDG+sw+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+fqrr+yw PHU03021.1 83 REaQIRWLKPAEVLFILRNHENHQ--------LSSGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYW 173 55589**************988........789************************************************************ PP CG-1 101 lLeeelekivlvhyle 116 +L+ ++++ivlvhy++ PHU03021.1 174 MLDPAYDHIVLVHYRD 189 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MVRNGIKTAF WLDQWLGHSS LKSTFPGLYS MISRTHAQVQ IPAPAEKYTL AVFFPSFLVL 60 VGKVTWWLSW WEVAGYDIND LVREAQIRWL KPAEVLFILR NHENHQLSSG SLFLFNKRVL 120 RFFRKDGHSW RKKKDGRTVG EAHERLKVGN AEALNCYYAH GEQNPNFQRR SYWMLDPAYD 180 HIVLVHYRDI TEGRQNPVFM SESSPISSAF SPSPRSYSTQ HTGSTVIASE SYELYQNQSS 240 PGEICSDAVI NNSGTSDTTG RTEEAISSPG LEMSQALRRL EEQLSLNDDS FKEIDPLYAD 300 AINDDSSFIQ MQGNSNGLLL QHRSGLSFSY INIFVECILT CLFLARYVYD NAIHFNFVQR 360 TANTFITSRI SLPPYSPPHH CWDNFPFAFV CTAITLIDPA FKSLTRTSRH SVTGCFFIKF 420 KHATIYSESS ESHHQDLTQD SDMWKDMLDD YGVSAAAESQ TKYLHKLDEN AMLQISSERC 480 AIETYGSYKW PYFSDKEAPM AQVPDFKQLE DFKYPTYPPD INTFGSNPDK YTTLFDQDHI 540 GTSLEDEVSL TIAQKQKFTI RDISPDWGYS SEATKVVIIG SFLCNPSECT WTCMFGDIEV 600 PVQIIQVGVI CCQAPRHLPG KVTLCVTSGN RESCSEVREF EYRVEPDDCA RNNQPDVVGV 660 YQSSEELLLL VRFVQLLLSD LSVQKGDSSE LANDFLEKSK ANEDSWSQVI ESLLFGTSTS 720 MITIDWLLQE LLKDKFQQWL CCKLQQKDNQ IGCSLSKKEQ GIIHMVAGLG YEWALHPILN 780 AGLSVNFRDI NGWTALHWAA RFGR

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MVRNGIKTAF WLDQWLGHSS LKSTFPGLYS MISRTHAQVQ IPAPAEKYTL AVFFPSFLVL  60
VGKVTWWLSW WEVAGYDIND LVREAQIRWL KPAEVLFILR NHENHQLSSG SLFLFNKRVL  120
RFFRKDGHSW RKKKDGRTVG EAHERLKVGN AEALNCYYAH GEQNPNFQRR SYWMLDPAYD  180
HIVLVHYRDI TEGRQNPVFM SESSPISSAF SPSPRSYSTQ HTGSTVIASE SYELYQNQSS  240
PGEICSDAVI NNSGTSDTTG RTEEAISSPG LEMSQALRRL EEQLSLNDDS FKEIDPLYAD  300
AINDDSSFIQ MQGNSNGLLL QHRSGLSFSY INIFVECILT CLFLARYVYD NAIHFNFVQR  360
TANTFITSRI SLPPYSPPHH CWDNFPFAFV CTAITLIDPA FKSLTRTSRH SVTGCFFIKF  420
KHATIYSESS ESHHQDLTQD SDMWKDMLDD YGVSAAAESQ TKYLHKLDEN AMLQISSERC  480
AIETYGSYKW PYFSDKEAPM AQVPDFKQLE DFKYPTYPPD INTFGSNPDK YTTLFDQDHI  540
GTSLEDEVSL TIAQKQKFTI RDISPDWGYS SEATKVVIIG SFLCNPSECT WTCMFGDIEV  600
PVQIIQVGVI CCQAPRHLPG KVTLCVTSGN RESCSEVREF EYRVEPDDCA RNNQPDVVGV  660
YQSSEELLLL VRFVQLLLSD LSVQKGDSSE LANDFLEKSK ANEDSWSQVI ESLLFGTSTS  720
MITIDWLLQE LLKDKFQQWL CCKLQQKDNQ IGCSLSKKEQ GIIHMVAGLG YEWALHPILN  780
AGLSVNFRDI NGWTALHWAA RFGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-85	CAMTA family protein