PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU03014.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 298aa    MW: 32804.4 Da    PI: 10.1115
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU03014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.71.7e-10556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+  l+ ++ ++G+g W+tI +          R+  ++k++w++ 
       PHU03014.1  5 KQKWTSEEEAALKAGILKHGPGKWRTILKDPEfsgvlFLRSNVDLKDKWRNM 56
                     79**********************************955***********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MGAPKQKWTS EEEAALKAGI LKHGPGKWRT ILKDPEFSGV LFLRSNVDLK DKWRNMTVMA  60
NGWSSREQTK LAVKKMKQAP KQDGSPMTDT TAAESDEEAA EARPATTSSG SPQIHGSKKS  120
MIRLDNLIME AISSLKEPGG SNKTTIAEYI EAQYWAPPNF KRLLSGKLKY LTATGKLIKM  180
KRRYRIVPTS TPSDSRRNLS ITLLDNKQRI FSKIDRDDLN MLTSQIDLEL AKMKHMKPQE  240
AAAAAAQAVA EAEAAIVEAE EADREADAAE ADAEAAQAFS VAANKTLHGR SAPRMVRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-91MYB_related family protein