PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU02967.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 26032.6 Da PI: 6.9422 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37 | 8e-12 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W eEd +l + + G +W+++++ g+ R++k+c++rw +yl PHU02967.1 14 RGPWKIEEDHKLMNFILNNGIQCWRLVPKLAGLMRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.4e-17 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+ E++++++++ lG++ W++Ia++++ gRt++++k++w++ PHU02967.1 67 RGALTEAEEDIIIKLHSHLGNR-WSKIAAHFP-GRTDNEIKNHWNT 110 7889******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGRQPCCDKI GLKRGPWKIE EDHKLMNFIL NNGIQCWRLV PKLAGLMRCG KSCRLRWINY 60 LRPDLKRGAL TEAEEDIIIK LHSHLGNRWS KIAAHFPGRT DNEIKNHWNT RIKKKLKFLG 120 IDPLTHKPIE QNDDIKQQVS VEIDENVKEL AEKTLDYPRE QQNIQNSTSS SSLNESLDMG 180 SSSEIFQNSH TLDMYNPGVE DPFQNWIGSP IHWDLFDNLE DNFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 1e-81 | MYB family protein |