PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02767.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ARF
Protein Properties Length: 891aa    MW: 98647.8 Da    PI: 6.3749
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.61.4e-24130231199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD v+F   ++++ +l+
  PHU02767.1 130 FCKTLTASDTSTHGGFSVPRRAAEKVfppldySQQPPCQ-ELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFI--WNENNQLL 225
                 99*****************************97677775.9************************************************..7888889* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 ++++r+
  PHU02767.1 226 LGIRRA 231
                 ***997 PP
2Auxin_resp120.99.6e-40256339183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k+ ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  PHU02767.1 256 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 339
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 891 aa     Download sequence    
MRVSSAGFNP QPEEGAGEKK CLNSELWHAC AGPLVSLPPV GSRVVYFPQG HSEQVAASTN  60
KEVDAHIPNY PGLPPQLICQ LHNLTMHADV ETDEVYAQMT LQPLSPQEQK DVCLLPAELG  120
IPSKQPTNYF CKTLTASDTS THGGFSVPRR AAEKVFPPLD YSQQPPCQEL IAKDLHGNEW  180
KFRHIFRGQP KRHLLTTGWS VFVSAKRLVA GDAVIFIWNE NNQLLLGIRR ANRPQTVMPS  240
SVLSSDSMHI GLLAAAAHAA ATNSRFTIFY NPRASPSEFV IPLAKYAKAV YHTRISVGMR  300
FRMLFETEES SVRRYMGTIT GISDLDPVRW PNSHWRSVKV GWDESTAGER QPRVSLWEIE  360
PLTTFPMYPS PFSLRLKRPW PSGLPSLPGF PNGDMTMNSP FSWLRGDMAD QGMQSLNFQG  420
FGVTPFVQPR IDASMFGLQP DILLTMAALD PSKLANQSLV QFQQSIPSSS VSLSQSQMLQ  480
PSHSQQNLVQ GFSENQLISQ AQMLQQQLQR RQNYSDQQQL LQPQLQQHQE VNSQFQHQQQ  540
TKAISSLSQM ASATQPQHSH LQVLSSTGPQ HTFSDILGNH VNASNNSVMQ NLLSSFSRDE  600
ASAVLNMHES HPLVSLSSSS KRIALESQLP SRVTPFVVSQ PEDVMANNAK VSNLSSLLPP  660
FPGRESFSDY RGVEDSQSNA LYGFTDSLNI LQTSMSNMKD SSGDNGSLSI PYATSTFTST  720
AGNEYPLNSD MTTSSCVDES GFLQSSENGD QANPTNRTFV KVHKSGSFGR SLDISKFSSY  780
HELRSELARM FGLEGLLEDP ERSGWQLVIV DRENDVLLLG DGPWQEFVNN VWYIKILSPL  840
EVQQMGKEGL DLPNGVQAQR LPGNVNGCDD YLNQKGSRST MNGIPLGSLD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein