PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU02579.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 311aa MW: 35537.5 Da PI: 6.1342

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU02579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.3e-18	86	139	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k PHU02579.1 86 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 139 456899***********************************************9 PP
2	HD-ZIP_I/II	129.3	1.6e-41	85	177	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkd+e+Lkr++da+k+en++L++++++L++e+++ PHU02579.1 85 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDHEVLKRQFDAVKAENDALQTQNQKLHAEIMA 177 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MTCTNYEMAF LPTNFMLQSP HEDEHHEPST SLTPILPSCS PQDFHGIASF LGKRSMSFSG 60 MEGNNTCEEN HGEDDLSDDG SQGGEKKRRL NMEQVKTLEK NFELGNKLEP ERKMQLARAL 120 GLQPRQIAIW FQNRRARWKT KQLEKDHEVL KRQFDAVKAE NDALQTQNQK LHAEIMALKN 180 REQPTESINL NKETEGSCSN RSENSSEIKL DISRTPAIDS PLSNHPNISS RPFFPPSMIR 240 PNNNNNNNNG VVVPHQLFHI NSSSSRPDLK LMDQNTTTNS TNIKEESLSN MFCGIDDQTS 300 FWPWLEQQHF N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	142	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-123	HD-ZIP family protein