PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02254.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 327aa    MW: 36301.1 Da    PI: 4.9996
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH452e-144493255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+e E+rRR++iN++f+ Lr l+P+      +K + a+ L ++++Y+++Lq
  PHU02254.1 44 RSKHSETEKRRRSKINERFQMLRNLMPQT----EQKRDNASFLLEVIQYVQYLQ 93
                899*************************8....799999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MKSGKNHHEE EEENEYDVGS NRDATPSSNS TKDGKNIDKA NAIRSKHSET EKRRRSKINE  60
RFQMLRNLMP QTEQKRDNAS FLLEVIQYVQ YLQETVQKYE GSNQPLSSAP SKLMPWRNSQ  120
WCAQSYPANP QALKNGIDSG PTYSGWFDEN LLTDTSSIQA NQQNPLESHP GGDVSYRSMD  180
TEKDLVSRAI ATSMPTPTTM PVPVQSDRAF SDLLPTPASN VWPSATNALN NQEFVIEDGT  240
ISISNTYSKA LLDSFTQALE TSGLVLSQAT LSVQIKIGKQ PLKGMGLGPS VAKDTANPPP  300
AGDQFMEESK DTNNDEELER AQKRLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-71bHLH family protein