PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02252.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 327aa    MW: 36105.7 Da    PI: 5.9365
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.91.1e-154493255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f++Lr l+P+     ++K + a+ L ++++Y+++Lq
  PHU02252.1 44 RSKHSVTEQRRRSKINERFQTLRNLIPHT----DQKRDTASFLSEVIQYVQYLQ 93
                899*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MKSGKGHHGE EEEDEYDVGS NRDATPSSNS TKEGKNSDKA NAIRSKHSVT EQRRRSKINE  60
RFQTLRNLIP HTDQKRDTAS FLSEVIQYVQ YLQETVQKYE GSYQPWNSEP TKLMPWRNSH  120
WRAHSFPATP QALRNSTDTG PTYSGRFDEN LLTDTSAMQA NQRNPLVSHP GGDVSYKSMD  180
QEKELVSRAI ATSIPLQASV PVPVQNDSAF SDSLPTPASD ECPSTTNALN GQEFVIEGGT  240
ISISSPYSPL LLSSFTQALE TAGLDLSQAT VSVQINLGKQ AFKGMSLGPS VAKDTENPPP  300
AGDQFVEKFR DTNNGEELDR AQKRLKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.18e-82bHLH family protein