PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU02117.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 155aa    MW: 17905.9 Da    PI: 7.7769
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU02117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.7e-057092123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C +Cgk F  + + ++H +++
  PHU02117.1 70 FNCRKCGKNFAVRGDWRTHEKNC 92
                78*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MHMWGHGSQY RKGPDSLKGT KQASSSMLRL PCYCCAEGCR NNIDYPRSKP LKDFRTLQTH  60
YKRKHGAKPF NCRKCGKNFA VRGDWRTHEK NCGKVWFCIC GSDFKHKRSL KDHVKAFGDG  120
HAPHSENSYY HHVEGDDDEE EDDDDDEEEH GNMGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.11e-79C2H2 family protein