PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU01786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRAS | ||||||||
Protein Properties | Length: 470aa MW: 52604.4 Da PI: 6.4507 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 472.2 | 2.7e-144 | 49 | 467 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l++lLl+cA +v+sg+le+a+ +L ++s+lasp+gd+mqR+a+yf eALa r++rs+++l+kal++++ s +see+ ++k+f+e++P+lk++++++N PHU01786.1 49 LIHLLLACASHVASGSLENANIALDHISQLASPSGDTMQRIASYFNEALADRILRSWPGLFKALRSTKLS--VVSEEILVRKMFFEIFPFLKVAFVVTN 145 689*************************************************************999998..6************************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaI ea+ege++vHi+D+++ ++lQW aLlq L++Rpegpp+lRiTgv++ +ke l ++++ L++ Ae+l++pf+fn v+++le+l++e+Lrvk+ PHU01786.1 146 QAIIEAMEGEKMVHIVDLNAAEPLQWRALLQDLSARPEGPPHLRITGVHQ----QKEVLDQMAHVLTQEAEKLDIPFQFNQ-VVSTLENLDVEKLRVKT 239 **************************************************....9**************************.7**************** PP GRAS 199 gEalaVnlvlqlhrll......................................................desvsles..erdevLklvkslsPkvvvv 241 gEala+++++qlh+ll ++ + d++L+++++lsPkv+vv PHU01786.1 240 GEALAISSIMQLHTLLahdnekksplplkhkngvtlpralinqntfgeflekdmangcspsndtasssplCST----GssKMDSFLNALWGLSPKVMVV 334 *************************************************************999875443333....2346799*************** PP GRAS 242 veqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340 +eq+++hn+++++er++e+l++y+alfd+le++lpr+s erikvE++llg+ei+++vaceg er+erhe+lekW +r+++aGF++vpls++a+ qa++l PHU01786.1 335 TEQDSNHNATTLMERLSESLHFYAALFDCLESTLPRTSLERIKVEKMLLGEEIKSIVACEGIERKERHEKLEKWFQRFDTAGFGNVPLSYYAMLQARRL 433 *************************************************************************************************** PP GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 l+ ++ +gy+++ee+g++v++W+dr+L+svS+Wr PHU01786.1 434 LQSYSCEGYKIKEENGCVVICWQDRALFSVSSWR 467 *********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence |
MLQDDGSSSV TSSSPLQVFP VMSLSPGLGF GSSNQWLKEL KSEERGLYLI HLLLACASHV 60 ASGSLENANI ALDHISQLAS PSGDTMQRIA SYFNEALADR ILRSWPGLFK ALRSTKLSVV 120 SEEILVRKMF FEIFPFLKVA FVVTNQAIIE AMEGEKMVHI VDLNAAEPLQ WRALLQDLSA 180 RPEGPPHLRI TGVHQQKEVL DQMAHVLTQE AEKLDIPFQF NQVVSTLENL DVEKLRVKTG 240 EALAISSIMQ LHTLLAHDNE KKSPLPLKHK NGVTLPRALI NQNTFGEFLE KDMANGCSPS 300 NDTASSSPLC STGSSKMDSF LNALWGLSPK VMVVTEQDSN HNATTLMERL SESLHFYAAL 360 FDCLESTLPR TSLERIKVEK MLLGEEIKSI VACEGIERKE RHEKLEKWFQ RFDTAGFGNV 420 PLSYYAMLQA RRLLQSYSCE GYKIKEENGC VVICWQDRAL FSVSSWRCRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |