PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU01579.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 291aa MW: 32110.2 Da PI: 6.4336

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU01579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.4	3.9e-34	49	103	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYR+ PHU01579.1 49 RPRLRWTAELHERFVDAVTQLGGPDKATPKTIMKAMGVKGLTLYHLKSHLQKYRI 103 59****************************************************7 PP
2	Myb_DNA-binding	75.1	9.9e-24	51	102	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI++ mg kg+tl+++ks++qky+ PHU01579.1 51 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMKAMGvKGLTLYHLKSHLQKYR 102 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MYSGLGMERN GGMGEYHNHH FHHNLQSSIT GEMNNLVGDA CLVLTADHRP RLRWTAELHE 60 RFVDAVTQLG GPDKATPKTI MKAMGVKGLT LYHLKSHLQK YRIGKQSKEA AENYKDESCM 120 AESQDTSSTA SGSSKVVAQD INDCGYQVTE ACRVQMEVQR RLQEQLEVQH HVQLRIEAQG 180 KYLQTILEKA CKALNYTALE SPELDTAREQ LSELAIKGAN ANNCDGIVAV SSLPEVVTSF 240 ENQNASDMPA TSLVSPTSIG VLKKRPRPLA NGDALPVEDN MTPVQWMMTN S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	268	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	2e-96	G2-like family protein