PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01541.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 277aa    MW: 30605.4 Da    PI: 10.0643
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.19.8e-30197255259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++pr+YY+Ct   gCp+kk+ver+ edp ++++tY++eH+h+
  PHU01541.1 197 SDECSWRKYGQKSIKGSPYPRAYYKCTNFpGCPAKKHVERAMEDPMMLIVTYKEEHHHT 255
                 699************************877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MVMFSKMNKE LALQEAASIG LKTMEHLIKL AANESVVKVD CREITDFVVA KLKKANAMAQ  60
AQAQAKVYDS LTTLSLSSYG YMDKERVLTP TQLSVVAPVH TGLTLDFRKP SVNAGVGTNV  120
GGGAGVMKWK EVFGSMENSI GSSTFLSSII GKQPSATEKR CREQEKSGDG SGKKRKVFPR  180
KVIRTPIISS KFADIPSDEC SWRKYGQKSI KGSPYPRAYY KCTNFPGCPA KKHVERAMED  240
PMMLIVTYKE EHHHTQAAMQ KYNSQMMAFG SIEGKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.25e-55WRKY family protein