PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01540.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 328aa    MW: 35905.1 Da    PI: 9.327
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.37.3e-29248306259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++p++YY+Ct   gCp+kk+ver+ +dp ++++tYe+eH+h+
  PHU01540.1 248 SDECSWRKYGQKSIKGSPYPQAYYKCTNFpGCPAKKHVERAMDDPMMLIVTYEEEHRHT 306
                 699************************877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MVMFSKMNEE LAFQEAASTG LKTMEHLIKL AANESVVKVD CREITDFVVA KLKKANAMVG  60
RTGHARFRCG PIQVQAQNEA ESQAQTQAKV HDSLTTLSLS PYGYMEKERV LTPTQLSAVA  120
PVHSGLTLDF RKPSVNTGVG TNVGGGAGVM KWKEFFGSME NTIGSSSFLS SIIGEGSGCI  180
ADVASPSSSM PLFPTAQIVS AGKQSSATEK RCREQEQSGD GSGKKRKVFP RKVIRTPIIS  240
SKFADIPSDE CSWRKYGQKS IKGSPYPQAY YKCTNFPGCP AKKHVERAMD DPMMLIVTYE  300
EEHRHTQAAM QKYNSQMMIF GSMEGKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.23e-70WRKY family protein