PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU01537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | WRKY | ||||||||
Protein Properties | Length: 255aa MW: 27607 Da PI: 10.8288 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 56.6 | 5e-18 | 193 | 251 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+++WrKYGqK++kgs++pr + + kk+ver+ +dp ++++tYe+eH+h+ PHU01537.1 193 ADECSWRKYGQKPIKGSPYPRLITSLPVFsNVQHKKHVERAMDDPMMLIMTYEEEHRHT 251 699******************987654435****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MVGRTGHARL RRAPVQAVQA QAQAKVQVHV HDSLTSLSLS PHGYMEKERV FAPAPLFVVA 60 PVAALVPTGL MLGFRKLRVN VVVAAGASGG ASVGDMKWKD AFGSMKNGIS SSFLSSATGE 120 GSRSISSVAL SSSSMLLRLM VQAISTGKQP SATGKKCHEQ EQSSDGSGKK RKVFPKKVIR 180 TPVISSKITD IPADECSWRK YGQKPIKGSP YPRLITSLPV FSNVQHKKHV ERAMDDPMML 240 IMTYEEEHRH TQVAM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.2 | 1e-34 | WRKY family protein |