PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01534.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 304aa    MW: 33432.4 Da    PI: 9.4792
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.82.2e-28242300259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYGqK ++gs++pr YY+Cts  gCp+kk+ver+ +dp v+++tYe+eH+h+
  PHU01534.1 242 ADECSWRKYGQKLINGSPHPRVYYKCTSFpGCPAKKHVERAMKDPMVLIVTYEEEHHHT 300
                 699************************877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MNKELALQEA ALTGLKTMEH LIKLATNESV VQVDYSEITD FAVAKLKKAN AMVGRTGHAR  60
FRRGPVQVQA QNKAESQAQA QVHDSLTSLS LSPYVYMEKE RVLASMTLSV VASVAAPVQT  120
ELTLGFKMPS VNDDVGGAGV GNMKWKDDFG SMKNWINSSS FLSFITGEGS ESIVNVVPPP  180
SSSMLLLPMA QVVSAEKQSF ATGKRCREQE QSDDGSGKKR KVFPRKVIRT SVISSKITDI  240
PADECSWRKY GQKLINGSPH PRVYYKCTSF PGCPAKKHVE RAMKDPMVLI VTYEEEHHHT  300
QVAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-63WRKY family protein