PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU01533.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 272aa MW: 30646 Da PI: 9.5182

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU01533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	74.9	1e-23	164	216	2	53
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYe 53 D+++WrKYGqK vk+s++pr+YY+Ct +Cp+kk+ve++ +dp +++ Y+ PHU01533.1 164 ADECSWRKYGQKLVKDSPYPRAYYKCTIFpKCPAKKHVEKAMDDPIMLIAYYK 216 699**********************877**********99999999997 PP
2	WRKY	31.8	2.8e-10	213	250	23	59
EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +YY+ ts + p+kk+ver+ +dp+++++tYe+eH+h+ PHU01533.1 213 AYYKPTSFsEYPTKKHVERAMDDPTMLIVTYEEEHHHT 250 6*998779*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MESTIQLQVD CREITDFDIA KLKKANSMVG RTGRARFRRG PVQVQPQAQN DVKSQAQAHQ 60 AQDSLSLLSL SPYGYMEKES TNTNVVVCSG AWNGSIANVA PSSSMSFFPM AQAVFAGKQP 120 SAIGKRCREK EQSDDGSSKK KRKVLPRKVI RTPVISSKIT DISADECSWR KYGQKLVKDS 180 PYPRAYYKCT IFPKCPAKKH VEKAMDDPIM LIAYYKPTSF SEYPTKKHVE RAMDDPTMLI 240 VTYEEEHHHT QVAMQEYNSQ MVAFGSAEEK KE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	144	KKKRKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.2	5e-45	WRKY family protein