PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU01028.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 389aa    MW: 43266.8 Da    PI: 4.644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU01028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-18121170255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp     +  +++lg+f taeeAa+a++  +++++g
  PHU01028.1 121 QYRGIRQRP-WGKWAAEIRDPQ----KgVHVWLGTFSTAEEAARAYDVEARRIRG 170
                 69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MCGGAIISDW IPPPRSSRRL TSDLLWDFSD LNNNNNNNEE KKKKKNGSRK TLRSEVVDFA  60
ADFQDFNDCF DEDFKDYSFD VKPLVFHASQ LSQPAPGSKS LNSVDSNKEI EKSSKRKRKN  120
QYRGIRQRPW GKWAAEIRDP QKGVHVWLGT FSTAEEAARA YDVEARRIRG NKAKVNFPDE  180
APVPAPRQAA KVNPEKVLSD ESSNPVLSDT ALMNLTDGCC NNLGFFEEKT KKLYGYEVLR  240
TTTVNMGPNS YVPPPAAGVY YNSDQGSNSF DPSDFGWGET CSRTPEISSV LSAAIECDET  300
QFVEGADVEV KLKSCSNNLV PDDGNTANKP PEEFPAFESQ MKFFHTPYPE ANWDVSVDAF  360
LNADASQGGE NAVDLWSIDE LSSLMGGVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.11e-60ERF family protein