PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00943.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 340aa    MW: 38522.4 Da    PI: 6.8999
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-19127176255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa  +++a+++++g
  PHU00943.1 127 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALVYDEAALRFKG 176
                 7********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MSYYTIFLDE KTLITILMST GPSKIITKVA TVDRRHGKRP FSSNESEEKE DIDESIFPIY  60
SERSQHDMSA MVSVLSQVIG NTNNNNATTN ISSLSSVHGI NPLTLPQSAV ATTNQIQEQG  120
NQLRKRHYRG VRQRPWGKWA AEIRDPKKAA RVWLGTFDTA EAAALVYDEA ALRFKGNKAK  180
LNFPERVQSG NTQYLATTHH HQQQLFDHQQ QPYSSINNNN NTNNNNSFDL ISHMVTQPNL  240
YQQHFPNVHH YTELLPGGSN NNIDHMMNFG VSEPSFYHQQ SSSGGNFASP NTSLELQQQQ  300
SGYYYNQEED FLRFPMNFGN SSTSIGPPSE SNWDDFGPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-43ERF family protein